Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELFKEFTFESAHRLPHVPEGHKCGRLHGHSFRVAIHIEGEVDPHTGWIRDFAEIKAIFKPIYEQLDHNYLNDIPGLENPTSENLCRWIWQQLKPLLPELSKVRVHETCTSGCEYRGD
4NTK Chain:F ((6-120))
--LFKDFTFEAAHRLPHVPEGHKAGRLHGHSFMVRLEITGEVDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPLLSAVMVKETCTAGCIYRG-
General information:
TITO was launched using:
RESULT:
Template:
4NTK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69930 for 816 contacts (-85.7/contact) +
2D Compatibility (PS) -12601 + (NN) -7159 + (LL) 236
1D Compatibility (HY) -12800 + (ID) 4400
Total energy: -106654.0 ( -130.70 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_4NTK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NTK-query.scw
PDB file :
Tito_Scwrl_4NTK.pdb
: