Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENLDALVSQALEAVRHTEDVNALEQIRVHYLGKKGELTQVMKTLGDLPAEERPKVGALINVAKEKVQDVLNARKTELEGAALAARLAAERIDVTLPG---RGQLSGGLHPVTRTLERIEQCFSRIG--------YEVAEG-PEVEDDYHNFEALNIPGHHPARAMHDTFYFNANMLLRTHTSPVQVRTMESQQPPIRIVCPGRVYRCD-SDLTHSPMFHQVEGLLV-----------------------------------DEGVSFADLKGTIEEFLRAFFEKQLEVRFRPSFFPFTEPSAEVDIQCVICSGNGCRVCKQTGWLEVMGCG--MVHPNVLRMSNIDPEKFQ-GFAFGMGAERLAMLRYGVNDLRLFFDNDLRFLGQFR |
| 3CMQ Chain:A ((28-307)) | -----------------------------------------------------------------------------------------SNLTRKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQWDLLHA--GLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINF-------------HG-EWLEVLGCGVMEQQLVNSAGAQ---DRIGWAFGLGLERLAMILYDIPDIRLFWCEDERFLKQF- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127232 for 1719 contacts (-74.0/contact) +
2D Compatibility (PS) -24200 + (NN) -5961 + (LL) 9032
1D Compatibility (HY) -18400 + (ID) 3800
Total energy: -170561.0 ( -99.22 by residue)
QMean score : 0.381
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