Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTYFDIPHRLVGKALYESYYDHFGQMDILSDGSLYLIYRRATEHVGG---SDG-R-VVFSKLEGGIWSAPTIVAQAG-GQDFRDVAGGTMP-SGRIVAASTVYET--------------------------------------------------------------------------------GEVKVYVSDDSGVTWVHKFTLARGGAD---YN--FAHGKSFQVG-----ARYVIPLYAATG-VNYELKWLESSDGGETWGEGSTIYSG-----------------NTPYNETSYLPVGDGVILAVARVGSGAGGALRQFISLDDGGTWTDQGNV--TAQNG-DSTDILVA---PSLSYIYSEGGTPHVVLLYTNRTTHFC--YYRTILL-----AKAVAGSS-----GWTERVPVYSAPAASGYTSQVVLGGRRILGNLFRETSSTTSGAYQFEVYLGGVPDFESDWFSVSSNSLYTLSHGLQRSPRRVVVEFARSSSPSTWNIVMPSYFNDGGHKGSGAQVEVGSLNIRLGTGAAVWGTGYFGGIDNSATTRFATGYYRVRAWI |
| 2BF6 Chain:A ((9-432)) | -------PVDLFHPGFLNSSNYRIPALFKTKEGTLIASIDARRHGGADAPNNDIDTAVRRSEDGGKTWDEGQIIMDYPDKSSVIDTTLIQDDETGRIFL-LVTHFPSKYGFWNAGLGSGFKNIDGKEYLCLYDSSGKEFTVRENVVYDKDSNKTEYTTNALGDLFKNGTKIDNINSSTAPLKAKGTSYINLVYSDDDGKTWSEPQNINFQVKKDWMKFLGIAPGRGIQIKNGEHKGRIVVPVYYTNEKGKQSSAVIYSDDSGKNWTIGESPNDNRKLENGKIINSKTLSDDAPQLTECQVVEMPNGQLKLFMRNLSG---YLNIATSFDGGATWDETVEKDTNVLEPYCQLSVINYSQKVDG--------KDAVIFSNPNARS-RSNGTVRIGLINQVGTYEN--G-EPKYEFDWKYNKLV--KPGYYAYSCLTELSNGNIGLLYEGTP-------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114811 for 2449 contacts (-46.9/contact) +
2D Compatibility (PS) -31894 + (NN) -13337 + (LL) 6196
1D Compatibility (HY) -5200 + (ID) 2750
Total energy: -161796.0 ( -66.07 by residue)
QMean score : 0.385
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