Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFNRVVCGKLSWFIQAGGSMPSLIMDIALSGERLQAIYGGRANRVLLRSRDGRRV------NLPAHHLRPFIGHDGVHGTFRLDFSEDG---------RLLALQRLA
2E12 Chain:A ((1-93))
MP-------------KYAPHVYTEQAQIATLEHWVKLLDGQ--ERVRIELDDGSMIAGTVAVRPTIQTYRDEQEREGSNGQLRIDHLDASQEPQWIWMDRIVAVHPMP
General information:
TITO was launched using:
RESULT:
Template:
2E12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22114 for 418 contacts (-52.9/contact) +
2D Compatibility (PS) -8075 + (NN) -379 + (LL) 1368
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -31550.0 ( -75.48 by residue)
QMean score : 0.097
(partial model without unconserved sides chains):
PDB file :
Tito_2E12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E12-query.scw
PDB file :
Tito_Scwrl_2E12.pdb
: