Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVLVIESSARQRGSVSRLLTAEFISHWKIAHPADRFQVRDLAREPLPHLDELLLGAWTTPC-DGHSAAERRALERSNRLTEELRMADVLVLAAPMYNFAIPSSLKSWFDHVLRAGLTFRYAEQGPEGLLQGKRAFVLTARGGIYA-----GGGLDHQEPYLRQVLGFVGIHDVTFIHAEGMNMGPEFREKGLARARERMRQALETDTSLCVPLPTLR
4N9Q Chain:B ((2-205))
-SRILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDF--YRP--LLRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGE--------DSCDEAEQRL------------------
General information:
TITO was launched using:
RESULT:
Template:
4N9Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108491 for 1423 contacts (-76.2/contact) +
2D Compatibility (PS) -19883 + (NN) -9487 + (LL) 1936
1D Compatibility (HY) -14400 + (ID) 3700
Total energy: -154025.0 ( -108.24 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_4N9Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4N9Q-query.scw
PDB file :
Tito_Scwrl_4N9Q.pdb
: