Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MIRRHSCKGVGSSVAWSLLGLAISAQSLAGTVTTDGADIVIKTKGGLEVATTDKEFSFKLGGRLQADYGRFDGYYTNNGNTADAAYFRRAYLEFGGTAYRDWKYQINYDLSRNVGNDSAGYFDEASVTYTG--------FNPVNLKFGRFYTDFG-----LE-KATSSKWVTALERNLTYDIADWVNDNVGTGIQASSVVGGMAFLSGSVFSENNNDTDGDSVKRYNLRGVFAPLHEPGNVVHLG----LQYAYRDLEDSAVDTRIRPRMG------MRGVSTNGGNDAGSNGNRGLFGGSS------AVEGLWKDDS--VWGLEGAWALG----AFSAQAEYLRRTVKAERDREDLKASGYYAQLAYTLTGEPRLYKLDGAKFDTIKPENKEIGAWELFYRYDSIKVEDDNIVVDSATR-EVGDAKGKTHTLGVNWYANEAVKVSANYVKAKTDKISNANGDDSGDGLVMRLQYVF |
| 4Y97 Chain:A ((157-598)) | PSQKYNSRSNRGEVVTSFGLAQGVSWSGRGGAGNIS-------LKVLGCPEALTGSYKSMFQ---KLPDIREVLTCKIEELGSELKEHYKIEAFTPLLAPA------QEPVTLLGQIGCDSNGKLNNKSVILEGDREHSSGAQIPVDLSELKEYSLFPGQVVIMEGINTTGRKLVATKLYEGVPLPFYQPTEEDADFEQSMVLVACGPYTTS-----------DSITYDPLLDLIAVINHDRPDVCILFGPFLDAKHEQVENCLLTSPFEDIFKQCLRTIIEGTRSSGSHLVFVPSLRDVHHEPVYPQPPFSYSDLSREDKKQVQFVSEPCSLSINGVIFGLTSTDLLFHLGAEEISSSSGTSDRFSRILKHILTQRSYYPLY-------PPQEDMAIDYESFYVYAQLPVTPDVLIIPSELRYFVKDVLG---CVCVNPGRLTKGQVGGTFARLYLRRPAADGAERQSPCIAVQVVRI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y97.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -9886 for 3067 contacts (-3.2/contact) +
2D Compatibility (PS) -41101 + (NN) 4924 + (LL) 1056
1D Compatibility (HY) -12800 + (ID) 3600
Total energy: -61407.0 ( -20.02 by residue)
QMean score : 0.051
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