Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFTSKPLSPQGRHVLITGASSGLGRETALHLAEQGFQVIAGVRRQEDGERLANACPS--GRISTLLIDVTDEESIGRAAAQVAEKVGDTGLWGLVNNAGICISAPLECVSSDLLRRQLEVNLIGQLAVTRAILP-LLRRGGAARLVNVTSGLGSVAIPYLGAYSAAQFAKEGVSDALRRELAPMGIQVSVVSPGAIWTPIWGKIASEGERALADAPDAVADLYRDTYLRFLQANEDGARNSATKPADVAAAVHAALTAAKPRTRYRVGADVRRGTLLARLLPDSVIDGMFRPIVTAAPAAKEEQRA |
2JAP Chain:C ((2-239)) | ------PSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG--GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGT--VVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYE--------QRISQIRKLQAQ------------DIAEAVRYAVTAPHHATVHEI--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -142572 for 2045 contacts (-69.7/contact) +
2D Compatibility (PS) -26043 + (NN) -10626 + (LL) 4428
1D Compatibility (HY) -10800 + (ID) 4300
Total energy: -189913.0 ( -92.87 by residue)
QMean score : 0.548
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