Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFTSKPLSPQGRHVLITGASSGLGRETALHLAEQGFQVIAGVRRQEDGERLANACPS--GRISTLLIDVTDEESIGRAAAQVAEKVGDTGLWGLVNNAGICISAPLECVSSDLLRRQLEVNLIGQLAVTRAILP-LLRRGGAARLVNVTSGLGSVAIPYLGAYSAAQFAKEGVSDALRRELAPMGIQVSVVSPGAIWTPIWGKIASEGERALADAPDAVADLYRDTYLRFLQANEDGARNSATKPADVAAAVHAALTAAKPRTRYRVGADVRRGTLLARLLPDSVIDGMFRPIVTAAPAAKEEQRA
2JAP Chain:C ((2-239))------PSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG--GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGT--VVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYE--------QRISQIRKLQAQ------------DIAEAVRYAVTAPHHATVHEI---------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2JAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142572 for 2045 contacts (-69.7/contact) +
2D Compatibility (PS) -26043 + (NN) -10626 + (LL) 4428
1D Compatibility (HY) -10800 + (ID) 4300
Total energy: -189913.0 ( -92.87 by residue)
QMean score : 0.548

(partial model without unconserved sides chains):
PDB file : Tito_2JAP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAP-query.scw
PDB file : Tito_Scwrl_2JAP.pdb: