Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNLIEVRDLSKTFTLHQQQGVVLNVLRGLNFNVAGGECLVLHGRSGAGKSTLLRTLYGNYLPA--GGSIRLRHAGDWLELVGAEPREVLAVRRQTLGYVSQFLRVIPRVATLD-VVMEPALARGWSRDSAELRARSLLARLNIPERLWQLAPGTFSGGEQQRVNIARGFMVEWPILLLDEPTASLDEANRQVVLELIGEAKAAGAALIGIFHDRAAREAVASRYLDMSQELSRQEQAHVV
2OLK Chain:B ((22-233))
-LQMIDVHQLKKSFG-------SLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCL--NLLEDFDEGEIII----DGINLKAKDTN--LNKVREEVGMVFQRFNLFPHMTVLNNITLAPMKVRKWPREKAEAKAMELLDKVGLKDK-AHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGMTMVVVTHEMGFAREVGDRVLFMD------------
General information:
TITO was launched using:
RESULT:
Template:
2OLK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123512 for 1660 contacts (-74.4/contact) +
2D Compatibility (PS) -22176 + (NN) -6588 + (LL) 2704
1D Compatibility (HY) -18800 + (ID) 3600
Total energy: -171972.0 ( -103.60 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_2OLK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OLK-query.scw
PDB file :
Tito_Scwrl_2OLK.pdb
: