Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAVIRVDSLNKTFARKQALFNLRLEIQAGEMVALIGASGSGKSTLLRHVAGLARCDRDNGGSIDVLGRRLQASGRLSGEVRRLRADIGYIFQQFNLVNRLSVLDNVLLGFLGRMPRWRGSLGLFSAEQKRQALEALARVGLADFAGQRASTLSGGQQQRVAIARALTQKAEVILADEPIASLDPESARKVMDILADINRHDGKTVVVTLHQVDYALRYCPRAVALKGGRILFDGSSEYL--------SEGFLNELYGAEGDTPLLFSDRARRGAESQPELTLARA
3C4J Chain:B ((22-263))-LQMIDVHQLKKSFGSLEVLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDE---GEIIIDGINLKAK---DTNLNKVREEVGMVFQRFNLFPHMTVLNNITLAPM-KVRKWPRE----KAEAK--AMELLDKVGLKDKAHAYPDSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLSVMKQL-ANEGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHERTKAFLSKVF-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 3C4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -171203 for 1924 contacts (-89.0/contact) +
2D Compatibility (PS) -25146 + (NN) -9800 + (LL) 1752
1D Compatibility (HY) -23600 + (ID) 4450
Total energy: -232447.0 ( -120.81 by residue)
QMean score : 0.523

(partial model without unconserved sides chains):
PDB file : Tito_3C4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C4J-query.scw
PDB file : Tito_Scwrl_3C4J.pdb: