Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTPLTLIATITAAPGHAEALERELRALVAPS-RAEAGCLQYDLHQDRHDSHLFYMIEQWRDDAALERHQNTEHFLRFSRGNEALLQNVKIDQLYRLA
3BM7 Chain:A ((18-113))
-QGMIGVVATLKVQPAKAAEFEKVFLDLAAKVKANEPGCLVYQLTRSKTEEGVYKVLELYASMDALKHHGGTDYFKAAGAAMGPTMAGAPVIEYLDA-
General information:
TITO was launched using:
RESULT:
Template:
3BM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27518 for 627 contacts (-43.9/contact) +
2D Compatibility (PS) -10614 + (NN) -4100 + (LL) 352
1D Compatibility (HY) -6000 + (ID) 950
Total energy: -48830.0 ( -77.88 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_3BM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BM7-query.scw
PDB file :
Tito_Scwrl_3BM7.pdb
: