Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKPCHFAQFDLQPAFLVDLDELGQRYRELVRSVHPDRFADAP-EREQRLALERAAQLNEAYQTLKSAPRRALYLLTLSGHELPLEATVQDPEFLLQQMQLREELEELQDSADLAGVATFKRRLKAAQAELEREFAACWDDAQRREEAERLVRRMQFLDKLAQEVRQLEERLDD
1WJZ Chain:A ((14-87))
-LKKDWYSILGADPS--ANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQ-------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WJZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12355 for 437 contacts (-28.3/contact) +
2D Compatibility (PS) -8330 + (NN) -9061 + (LL) 10000
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -23196.0 ( -53.08 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_1WJZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WJZ-query.scw
PDB file :
Tito_Scwrl_1WJZ.pdb
: