Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHATSSDDFSLSSRVALVTGAGRGIGRGIALALARAGADVAVADLDPQVAEETAAAIRSLGRRSLALGVDVSDGDSVRAMVERVATEFGRLDVAVNNAGVISIRKVAELSLADWDRVMNVNARGVFLCCQ-AELPLMQAQRWGRIVNLSSIAGKVGLPDLAHYCASKFAVIGFSNALAKEVARDGVTVNALCPGIVGTGM------WRGEDGLSGRWRQAGESEAQSWERHQASLLPQGEAQTVEDMGQLVVYLA--CAPHVTGQAIAVDGGFSL
3AK4 Chain:B ((8-262))--------FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGG---FAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAE--LRGMTPEAVRAE-------YVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGVRM


General information:
TITO was launched using:
RESULT:

Template: 3AK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159012 for 2142 contacts (-74.2/contact) +
2D Compatibility (PS) -26167 + (NN) -6292 + (LL) 804
1D Compatibility (HY) -17600 + (ID) 5550
Total energy: -213817.0 ( -99.82 by residue)
QMean score : 0.484

(partial model without unconserved sides chains):
PDB file : Tito_3AK4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AK4-query.scw
PDB file : Tito_Scwrl_3AK4.pdb: