Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNNSNLAAARNLIQVVTGEWKSRCVYVATRLGLADLIESGIDSDETLAAAVGSDAERIHRLMRLLVAFEIFQGDTRDGYANTPTSHLLR--DVEGSFRDMVLFYGEEFHAAWTPACEALLSGTPGFELAFGEDFYSYLKRCPDAGRRFLLAMKASNLAFH-EIPRLLDFR-GRSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQ--EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASE-PSPMSVLWDVHLFMA-CAGRHRTTEEVVDLLGRGGFAVERIVDLPMETRMIVAARA |
| 3MCZ Chain:A ((23-349)) | ------TSVVDLVKLSDQYRQSAILHYAVADKLFDLTQ-TGRTPAEVAASFGMVEGKAAILLHALAALGLLTKE-GDAFRNTALTERYLTTTSADYIGPIVEHQ-YLQWDNWPRLGEILRSEKPLAFQQ--ESRFA---HDTRARDAFNDAMVRLSQPMVDVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAGVVRDAGLAVGERS--IGRYTLLIGQRS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163723 for 2501 contacts (-65.5/contact) +
2D Compatibility (PS) -34993 + (NN) -19260 + (LL) 360
1D Compatibility (HY) -14000 + (ID) 2850
Total energy: -234466.0 ( -93.75 by residue)
QMean score : 0.447
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