Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQGHPEVIDYLNTLLTGELAARDQYFIHSRMYEDWGFSKLYERLNHEMEEETQHADALLRRILLLEGTPRMRP-DDIHPGTTVPEMLEADLKLERHVRAALAKGIALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGLIARMGLENYLQSQI
2FKZ Chain:D ((1-154))
MKGDKIVIQHLNKILGNELIAINQYFLHARMYEDWGLEKLGKHEYHESIDEMKHADKLIKRILFLEGLPNLQELGKLLIGEHTKEMLECDLKLEQAGLPDLKAAIAYCESVGDYASRELLE-DILESEEDHIDWLETQLDLIDKIGLENYLQSQM
General information:
TITO was launched using:
RESULT:
Template:
2FKZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59722 for 1160 contacts (-51.5/contact) +
2D Compatibility (PS) -17332 + (NN) -14972 + (LL) 144
1D Compatibility (HY) -14800 + (ID) 3800
Total energy: -110482.0 ( -95.24 by residue)
QMean score : 0.672
(partial model without unconserved sides chains):
PDB file :
Tito_2FKZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FKZ-query.scw
PDB file :
Tito_Scwrl_2FKZ.pdb
: