Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRMPLATASLLALAISLAGCGDDKKAEAPATPAAST-QPAAPAAAPAAKVD-EAAAK-AVIKNYADLAEAT---FADALSTAKDLQKAIDAFLAKPDAETLKAAKEAWFAARTPYSQSEAFRFG-NAIIDDWEGQVNAWPLDEGLIDYVAKDYQHALGNPGATANIVANTEIQVGEDKIDVKEITGEKLASLNELGGSEANVATGYHAIEFLLWGQDLNGTGPGAGNRPATDYAQGKDCTGGHCDRRAAYLKAVTDLLVSDLEYMAGQWKAGV-ADNYRAKLEAEPVDTGLRKMFFGMGSLSLGELAGERMKVALEANSTEDEHDCFSDDTHHTLFFNGKSIRNIYLGEYKRIDGSVVKGPSL-ADLVAKADAAANDTL-KADLADTEAKLQAIVDSAEKDGVHFDQMIAPDNKDGQQKIRDAIAALVKQTGAIEQAAGKLGIQDLKPDNADHEF |
| 2NRJ Chain:A ((2-341)) | -----------------LSEIEQTNNGDTALSANEARMKETLQKAGLFAK-SMNAYSYMLIKNPDVNFEGITINGYVDLPGRIVQDQKNARAHAVTWDTKVKKQLLDTLNGIVEYDTTFDNYYETMVEAINT--------------------------GDGETLKEGITDLRGEIQQNQKYAQQLIEELTKLRDSIGHDVRAFGSNKELLQSILKNQGAD----------------------------VDADQKRLEEVLGSVNYYKQLEGFNVMKGAILGLPIIGGIIVGVARDNLGKLEPLLAELRQTVDYKVTLNRVVGVAYSNIN----------------------------------EMHKALDDAINALT--YMSTQWHDLDSQYSGVLGHIENAAQKADQNKFKFLKPNLNAAKDSWKTLRTDAVTLKEGIKELKVET---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2NRJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 81335 for 2411 contacts (33.7/contact) +
2D Compatibility (PS) -33705 + (NN) -4979 + (LL) 4840
1D Compatibility (HY) 3200 + (ID) 1250
Total energy: 49441.0 ( 20.51 by residue)
QMean score : 0.101
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