Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRG---------------KGLKSL---VK-APLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNAVA------GT---ANRSLA-------PIARRVCEAFPDTFPA-----SDKRLTTGNPVRGELFLDAHARAPLTGRRVNLLVLGGSLGAEPLNKLLPEALAQVPLE---IRPAIRHQAGRQHAEITAERYRTVAVEADVAPFISDMAAAYAWADLVICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAAQLSEVLMHPETLRSMADQARSLAKPEATRTVVDACLEVARG |
2P6P Chain:A ((1-378)) | --MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQD--MGPVVTGVGLPAVATTDLPIRHFITTDREGRPEAIPSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSY--VAPLLALHLGVPHARQTWDAVDADGIHPGADAELRPELSELGLERLPAPDLFIDICPPSLRPANAAPARMMRHVATSRQCPLE---PWMYTRDTRQRVLVTSGSRVAKESYDR-NFDFLRGLAKDLVRWDVELIVAAPDTVAEALRAE---V-PQARV-GWTP-LDVVAPTCDLLVHHAGGVSTLTGLSAGVPQLLIPK----GSVLEAPARRVADYGAAIALLPGEDSTEAIADSCQELQAKDTYARRAQDLSREISGMPLPATVVTALEQLA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P6P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181885 for 2989 contacts (-60.9/contact) +
2D Compatibility (PS) -36233 + (NN) -14873 + (LL) 1240
1D Compatibility (HY) -4800 + (ID) 3300
Total energy: -239851.0 ( -80.24 by residue)
QMean score : 0.490
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