Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTLLRRGLLVFLAAFPLLSMAAPTPQQVVQGTVDELLSDIKANKAAYKAD---PQKLYATLDRILGPVVDAEGIAKSVMTVKYSRQASPEQIKRFEEVFKNSLMQFYGNALLEYDNQDIRVLPSSAKPSDDRASVNMEIRDSKGTVYPVSYTMTNLAGGWKVRNVIINGINIGKLFRDQFADTMQKNRNDLEKTIAGWGEVVAKAKETAKAEEAGAK |
4HWC Chain:A ((4-89)) | ---------------------SASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVTVIELLMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALKVKN--------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HWC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7427 for 532 contacts (-14.0/contact) +
2D Compatibility (PS) -8580 + (NN) 1102 + (LL) 8972
1D Compatibility (HY) -1600 + (ID) 650
Total energy: -8183.0 ( -15.38 by residue)
QMean score : 0.503
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