Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRLEQILTPGRSLVNVPGGSKKRVLEQIANLVARELPEFD----AQTIFENLVAREKLG----------S---TGFGN----------------------G-----------IAIPH---------CRLSGCQSPISAVLHLDAPVDFDA-LDGAPVDLLFVLLVPEAATEEHLELLRQIAAMLDRADVRDRLRSAPTAEALYQIVVDVQNGQ
1HYN Chain:P ((110-316))
---LRRVFTKGTVLLDLQETSLAGVANQLLDRFIFE--DQIRPQDREELLRALLLKHSHAGELEALGGVKPAVLTRSGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILEKIPPDSEATLVLVGRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHIDYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLD--
General information:
TITO was launched using:
RESULT:
Template:
1HYN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97716 for 938 contacts (-104.2/contact) +
2D Compatibility (PS) -16542 + (NN) -9927 + (LL) 496
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -132539.0 ( -141.30 by residue)
QMean score : 0.641
(partial model without unconserved sides chains):
PDB file :
Tito_1HYN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYN-query.scw
PDB file :
Tito_Scwrl_1HYN.pdb
: