Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MALERSDVEKIAHLARLGLSEADLPRTTETLNNILGLIDQMQAVDTSGVEPLAHPLEATQRLRPDAVTETDHRDAYQTIAPAVEEGLYLVPKVIES
2KUB Chain:A ((128-208))
ENLDKMISEAEVLNDMAARKLITLDAEQQLELMKSLVATQSQLEATKNLIGDPNA--------------TVADLQIAYTTLGNNTQALGNELIKL---
General information:
TITO was launched using:
RESULT:
Template:
2KUB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22760 for 543 contacts (-41.9/contact) +
2D Compatibility (PS) -8360 + (NN) -2567 + (LL) 1276
1D Compatibility (HY) 400 + (ID) 800
Total energy: -32811.0 ( -60.43 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_2KUB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KUB-query.scw
PDB file :
Tito_Scwrl_2KUB.pdb
: