Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDEQPLSRPGAHVKYAVLGATGLLGHHAARAIRAAGH------DLVLIHRPSSQ---I--QRL-AYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRP--RRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQA-RNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGE-MTHYVAG--QRNVIDAAEAGRGLLMALERGRIGERYLLTG-HNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELGFFSTTALDDTLLRAIDWFRDNGYFNA |
| 1R6D Chain:A ((1-315)) | ------------MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDS-GSWTESSPL----EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRK----------------VADR-KG--------HDLRYSLDGGKIERELGYRPQVSFADGLARTVRWYRENR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168222 for 2512 contacts (-67.0/contact) +
2D Compatibility (PS) -32184 + (NN) -11943 + (LL) 3356
1D Compatibility (HY) -8000 + (ID) 3300
Total energy: -220293.0 ( -87.70 by residue)
QMean score : 0.455
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