Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFS-LVRFGGDQARYDKTYAGAHPIQPEDIAETIFWIMNQPAHLNINSLEIMPVSQSWAGFAIHRES
2JAP Chain:B ((11-246))-----LITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLR--SKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYAVTAPHHATVHEIFIRPTDQ-----------


General information:
TITO was launched using:
RESULT:

Template: 2JAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134443 for 2029 contacts (-66.3/contact) +
2D Compatibility (PS) -24939 + (NN) -3256 + (LL) 880
1D Compatibility (HY) -14800 + (ID) 4400
Total energy: -180958.0 ( -89.19 by residue)
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_2JAP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JAP-query.scw
PDB file : Tito_Scwrl_2JAP.pdb: