Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGF-SKNKDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQRIWIG-EEEVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPGLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEG-LEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVNRGIVVDRSLRTSHANIYALGDCAEVDGL------NLLYVMPLMACARALAQTLAGNPSQVAYGPMPVTVKTPACPLVVSPPPRGMDGQ-WLVEGSGTDLKVLCRDTAGRVIGYALTGAAVNEKLALNKELPGLMA |
| 3FG2 Chain:P ((1-380)) | ---NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLM-FRPEKFFQDQAIELIS-DRMVSIDREGRKLLLASGTAIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTAAGIIVDQQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGDAKPYDGYPWFWSDQGDD-KLQIVGLTAGFDQVVIRGSVAERSFSAFCY-KAGKLIGIESVNRAADHVFGRKI------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FG2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -290213 for 3163 contacts (-91.8/contact) +
2D Compatibility (PS) -40907 + (NN) -23256 + (LL) 1012
1D Compatibility (HY) -22400 + (ID) 5000
Total energy: -380764.0 ( -120.38 by residue)
QMean score : 0.448
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