Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMRFSGISGCLSAAVLALGVGGAPVVQADALGDSLEQAHIRKATFAAPAWEGYTNADGSGLYWDLLKQVYAPYGLDVKFINMP-WNRANKLMTAGS--M--VDGVPGEIPGVE-GKLYAQLPIDIEYHGVMHAAKT-PFSGRASLTGKRVGWRHSYNLIPAEQR-DFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPI--AQLPPGKESFMTFADSASGRLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ |
| 2PYY Chain:A ((4-223)) | ------------------------------------------PLLVATRVIPPFVLSNLSGFSIDLWRSIATQIGIESKLIEYSSVPELISAIKDNKVNLGIAAISITA--EREQNFDFSL-PIFASGLQIMVRN--GDIRSIDDLPGKVVATTAGSTAATYLREHHISVLEVPKIEEAYKALQTKKADAVVFDAPVLLFYAANEG--KGKVEIVGSILRE-ESYGIILPNN---SPYRKPINQALLNLKENGTYQSLYDKWFDP----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PYY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69434 for 1594 contacts (-43.6/contact) +
2D Compatibility (PS) -21956 + (NN) -1900 + (LL) 3976
1D Compatibility (HY) -9200 + (ID) 1400
Total energy: -99914.0 ( -62.68 by residue)
QMean score : 0.446
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