Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNRLQPVRLVSFVTTDLAGITRGRSLPLATLEEQLASGCGWVPANSSLTPQDLIDESSPWGSHGDLRLLPDPNSRVRVEQGPDAAAPALDYLHGNLVETDGTPWPACPRSLLRAEVERYRDSGLQVIAAFEHEFSLLGLPGERPAAAFSLQAQRAAGQFPGWLVSALAQAGTEPEMFLPEYGQRQYEVTCRPAQGVAAADRAVNVREVTREVARQMGLRTCFAPLPAPGAVTNGVHLHLSLQHADGSPLLYEPGRPNDLSELGEHWAAGVLAHLPALCALTAPTAASYLRLKPHHWSAAYACLGLRNREAALRICPVVSVGGKPLGKQYNLEFRPMDATTCPHLAMAAVLIAGRLGIERRLPLRALADVDPHGLSDEERQARGIQALPATLGDALDCLQRDEALCAE---LPKPLLDTYLAMKRHELALTAGLSDDDLCRHYAELY |
2LGS Chain:A ((218-449)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSL--AKNGTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVP----PVMLAYSARNRSASIRI-PVVA---SP--KARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMD---------------IPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREE-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120045 for 1678 contacts (-71.5/contact) +
2D Compatibility (PS) -22688 + (NN) -14223 + (LL) 12280
1D Compatibility (HY) -9600 + (ID) 3600
Total energy: -157876.0 ( -94.09 by residue)
QMean score : 0.485
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