Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAIHKALVMCLGLPLFLFPGAWAQGHVPPGCSQGLNPLYYNLCDRSGAWGIVLEAVAGAGIVTTFVLTIILVASLPFVQDTKKRSLLGTQVFFLLGTLGLFCLVFACVVKPDFSTCASRRFLFGVLFAICFSCLAAHVFALNFLARKNHGPRGWVIFTVA-----------LLLTLVEVIINTEWLIITLVRGSGEGGPQGNSSAGW--AVASPCAIANMDFVMALIYVMLLLLGAFLGAWPALCGRYKRWRKHGVFVLLTTATSVAIWVVWIVMYTYGNKQHNSPTWDDPTLAIALAANAWAFVLFYVIPEVSQVTKSSPEQSYQGDMYPTRGVGYETILKEQKGQSMFVENKAFSMDEPVAAKRPVSPYSGYNGQLLTSVYQPTEMALMHKVPSEGAYD------IILPRATANSQVMGSANSTLRAEDMYSAQSHQAATPPKDGKNSQVFRNPYVWD------------------ |
| 3JA7 Chain:A ((1-447)) | -----------------------------NWISELIDTYRNLMNNYEVDNAVSEIVSDA-IVYEDDTEVVALNLDKSKFSPKIKNMMLDEFSDVLNHLS---------FQRKGSDHFRRWYVDSRIFFHKIIDPKRPKEGIKELRRLDPRQVQYVYFIYDTAHESYACDGRMYEAGTKIKIPKAAVVYA---HSGLVDCCGKNIIGYLHRAVKPANQLKLLEDAVVIYRITRAPDRRVWYVDTGNMPARKAAEHMQHVMNTMKNRV---VYDASTGKIKNQQHNMSMTEDYWLQ---RRDGKAVTEVDTLPGADNTGNMEDIRWFRQALYMALRVPLSRIPQDQQGGVMFDSGTSITRDELTFAKF-IRELQHKFEEVFLDPLK-TNLLLKGIITEDEWNDEINNIKIEFHRDSYFAELKEAEILERRINMLTMAEPFIGKYISHRTAMKDILQMTDEEIEQEAKQIEEESKEARFQD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JA7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170136 for 2356 contacts (-72.2/contact) +
2D Compatibility (PS) -40271 + (NN) 3529 + (LL) 4432
1D Compatibility (HY) -800 + (ID) 2950
Total energy: -206196.0 ( -87.52 by residue)
QMean score : 0.124
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