Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESALPSIFTLVIIAEFIIGNLSNGFIVLINCIDWVSKRELSSVDKLLIILAISRIGLI------WEILVSWFLALHYLAIFVSGTGLRIMIFSWI-VSNHFNLWLATIFSIFYLLKIASFSSPAFLYLKWRVNKVILMILLGTLVFLF-LNLIQINMHIKDWLDRYERNTTWNFSMSDFETFSVSVKF--------------TMTMFSLTPFTVAFISFLLLIFSLQKHLQKMQLNYKG---HRDPRTKVHTNALKIVISF--------LLFYASFFLCVLISWISELYQNTVIYMLCETIGVFSPSSHSFLLILGNAKLRQAFLLVAAKVWAKR---- |
| 1D2R Chain:A ((1-326)) | -------------MKTIFSGIQPSGVITIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQDPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVPAHAQAAWMLQCIVYIGELERMTQFKEKSAGAAAAAAGLLTYPPLMAADILLYNTDIVPVGEDQKQHIE-LTRDLAERFNKRYGELFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKSAVTDSEGTIRYDKEAKPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESEELDRVLDEGAEKANRVASEMVRKMEQAMGLGR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298925 for 2219 contacts (-134.7/contact) +
2D Compatibility (PS) -29642 + (NN) -7146 + (LL) 1496
1D Compatibility (HY) 2000 + (ID) 2150
Total energy: -334367.0 ( -150.68 by residue)
QMean score : 0.219
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