Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTFIPIIFSSVVVVLFVIGNFANGFIA-----LVNSIERVKRQKISFADQILTALAVSRVGLLWVLLLNWYSTVF---NPA---FYSVEVRTTAYNVWAVTGHFSNWLATSLSIFYLLKIANFSNLIFLHLKRRVKSVILVMLLGPLLFLACQLFVINMKEIVRTKEYEGNL-TWKIKLRSAVYLSDATVTTLGNLVPFTLTLLCFLLLICSLCKHLKKMQLHGKGSQDPSTKVHI----KALQTVIFFLLLCAVYFLS----------IMISVWSFGSLENKPVF---MFCKAIRFSYPSIHPFILIWGNKKLKQTFLSVLRQVRYWVKGEKPSSP |
| 4CFP Chain:A ((15-341)) | DTNGFDILMGQFAHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRAIIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVD--NTGQPIRWEGRASNFADYLLKNRLKSRSN-------GLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTQSSFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAMLNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLTTRHPSAESRRYLYKVNTAQKSYRRR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CFP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234530 for 2288 contacts (-102.5/contact) +
2D Compatibility (PS) -30518 + (NN) -182 + (LL) 1488
1D Compatibility (HY) 1200 + (ID) 2300
Total energy: -264842.0 ( -115.75 by residue)
QMean score : 0.173
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