Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MADKVQTTLLFLAVGEFSVGILGNAFIGLVNCMDWVKKRKIASIDLILTSLAISRICLLCVILLDC-FILVLYPDVYATGKEMRIIDFFWTLTNHLSIWFATCLSIYYFFKIGNFFHPLFLWMKWRIDRVISWILLGCVVLSVFISLPATENLNADFRFCVKAKRKTNLTWSCRVNKTQH-ASTKLFLNLATLLPFCVCLMSFFLLILSLRRHIRRMQLSATGCRDPSTEA-HVRALKAVISFLL------LFIAYYLSFLIAT-SSYFMP----ETELAVIFGESIALIYPSSHSFILILGNNKLRHASLKVIWKVMSILKGRKFQQHKQI |
| 4PX7 Chain:A ((1-258)) | -------------------------------------------------GRSIARRTAVGAALLLVMPVAVWISGWRWQPGSWLLKAAFWVTETVTQPWGVI------------THLILFGWFLWCLR------FRIKAAFVLFAILAAAILVGQGVKSWIKDKVQEPRPFVIWLEKTHHMPVDKFYTLK------RAERGNLVKEQLAEPQYLRSHWQKETGFAFPSGHTMFAASWALLAVGLLWPRRRTLTIAILLVWATGVMGSRLLLGMHWPRDLVVATLISWALVAVATWLAQRICGPLTPPEENREIAQREQESLEHH-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4PX7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159627 for 1611 contacts (-99.1/contact) +
2D Compatibility (PS) -24590 + (NN) -10370 + (LL) 7524
1D Compatibility (HY) -800 + (ID) 2100
Total energy: -189963.0 ( -117.92 by residue)
QMean score : 0.216
|
|
|