Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPEVTKLDNGLRIITEQMRDIDSVALNIRVGVGSRAESANQNGISHFLEHMAFKGTKTRTAFEIAKTFDDIGGVFNASTGRERTSYYAKVLKKDVKIGIDILIDILMNSTFPKDELEREKGVVIQEIFQINDSPSDIIFDKYFEAAYKDQPFGRSILGTQDTVKSFAQGDLNNYINEHYFGENIIFAVAGNVEHEEIAQLTKDFL-------SKVSSQKLKESQNANCTGGEYLEHRKLDQVHLLIGFPSVSCHDDRYHTFQVLDSIL---------GSGMSSRLFQEVREKQGLAYSVYSFNSSYTDTGMLSIFAGTDSS--NLDKLLKSITTELKKLSTNDLREEEVNRVKERIKSQILMSRESVSSCAEALEHYYGNYNRYISKDELIEKTSAVTTADVKRAVEELLSKHEKTTLAAIGEIKSLPGYDKVVSMLRA |
| 1HR7 Chain:D ((10-432)) | ----SKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLQHLAFKGTQNRPQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVLDNSAIERERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTDLKDYITKNYKGDRMVLAGAGAVDHEKLVQYAQKYFGHVPKSESPVPLGSPRGPLPVFCRGERFIKENTLPTTHIAIALEGVSWSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAVAASQNGSLANSYMSFSTSYADSGLWGMYIVTDSNEHNVRLIVNEILKEWKRIKSGKISDAEVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWANYRL-QNKPVSMVALGNTSTVPNVSYIEEKLNQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HR7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161158 for 3334 contacts (-48.3/contact) +
2D Compatibility (PS) -42944 + (NN) -10848 + (LL) 336
1D Compatibility (HY) -26000 + (ID) 6600
Total energy: -247214.0 ( -74.15 by residue)
QMean score : 0.502
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