Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MILFSLLFSQSNTGARVILDKEIFYTELDGKMDLRFSYTFNKDSFNIKPKDKTSSYSYLRLFYLQRVYPNTQMGFNIKAEVSNISNLKALDIEKLNMEEWYFIIKNQGLGSIEYGKRNLVSQSMLINTSKIYVAAGGANGYWANYANLLGNEKKDDGAGYDKDEVFWVKPSIYSNYSGLKLKLKQPVVSYISPEIYNFQLGLSYVPGKNNLQYNNLVASGLSYKNGLSDDISFTTTLTGEFARGDLADCTNK---NPSNLQCHNQLLHWNFGLKLKFFNLDCIFSYGNSGKSGKKLDSEVSSTYYMNAGVAYRSDSRKLSLTYFSGGQDIIGKGINKLTSYALSLEYPLFMGTSYYFDIVKFNTEEPKVMNNNSGYILLAGLKLIF |
3FID Chain:A ((1-296)) | -SSLAISVANDD----------------AGIFQPSLNALYGHPAAD-----RGDYTAGLFLGYSHDLTDASQLSFHIAQDIYSPSGANKRKPEAVKGDRAF-----SAFLHTGLEWNSLATNWLRYRLGTDIGVIG-------------------PDAGGQEVQNRAHRIIGAEKYPAWQDQIENRYGYTAKGMVSLTP-----AIDILGVNVGFYPEVSAVGGNLFQYLGYGATVALGNDKTFNSDNGFGLLSRRGLIHTQKEGLIYKVFAGVERREVDKNYTLQGKTLQTKMETVDINKTVDEYRVGATIGYSPVAFSLSLNKVTSEFRTGDDYSYINGDITFFF--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32090 for 2490 contacts (12.9/contact) +
2D Compatibility (PS) -30932 + (NN) -3761 + (LL) 5580
1D Compatibility (HY) 8000 + (ID) 1150
Total energy: 9827.0 ( 3.95 by residue)
QMean score : 0.133
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