Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSNYIQNSGTRVIRDELQATGKVRENEDQPVENIKITNDHAFYKLICEKLVQGDFSVEQFNLLHYDISEKMIEKPFTIKEINDFCEKNDIPLFTVNELLTLVPKDDIKCYVDYETDSVRNHDHGYIADQINIKASYIKADLVNHQSYQDYITDSDTYYGFIYKKLIVSDALEKLERGETEA-QIRESLGNINRKEIKELLEKVPQGSLKEWLSDPANKGYTDVEYHVLYEKISEELVHTSMSINRIKEIYDKYGIVPPTESEFESLKKVQGEKRSIEYHEQKTGLTFQGRINLNVTDNNADNEFSLNIDLFQNKNFEDLTDQNGDGVINNEGLLKSLEDTVKTFNEVFGIKKDNNPLLVYGNIANFRLFLFESKESYQKYLSGDHDAHIPGGGVAQFSDNNYISNMYSHAENARSDFNGDKEGNCKDYNYVIKHELVHALTFYLTSKLDLGKVLMEGLAEYVTHLTEGEKPADFAKLVGEEYKEHTLEEIIKGAVDPYQTGAAIIAYIEETYPNFIDNLLYAATEDRKTLNGRFYFKEMMQKIYQSEEDKIQKGEGFSNWVKTYSSAENITIEPGHAQHEQQAVGNEKDEAQSYSSKGQVSEDRTEVHPTGSFRGLEVPKKPVIHEQNKGQENIVLKDTILKIEKSYERDSEGKHKANVIIDYYDMKALYDRVAGAKKQSVLKFWNKLAESEYKVGALSEDKYYFKDGKFVIHDSNEKKLVVLPEDKVSIKIMKDGNHYDLAISNKEGKVISSITKIDNLNYELLLDISDFSLEAQDSTTFSDQHNEYDLYLENGLVKMFDCASDHIYHDHSLI
3MMP Chain:F ((7-573))--------------SRNSLSAQLRRAANTRIE---------------------------------------VEGNLALSIANDLLLAYGQSPFNS-------------------EAECISFSPRFDGTPDDFRINYLKAEIMSKYD------------DFSLGIDTEAVAWEKFLAAEAECALTNARLYRPFNFSLGESCIHMARRKIAKLIGDVPS--VEGMLRHCRFSG-GATTTNNRSYGHPSFKFALPQACTPRALKYVLALRA--------STHFDTRISDISPFNKAVTVPKNSKTDRCIAIEPGWNMFFQLGIGGILRDRLRCWGI--DLNDQTINQRRAHEGSVTNNLATVDLSAASDSI----SLALCELLLP---------------------PGWFEVLMDLRSPKGRLPDGSVVTYEKI--------SSMGNGYTFELESLIFASLARSVCEILDLD----------------------SSEVTVYGDDIILPSCAVPALREVFKYVGFTTNTKKTFSEGP--FRESCGKHYYSGVD-----------VTPFYIRHRIV--------SPADLILVLNNLYRWATIDGVWD-----------------------------------PRAHSVYLKYRKLLPKQLQRNTIPDGYGDGALVGSVLINPFAKNR--------------------------------GWIRYVPVITDHTRDRERAELGSYLYDLFSRCLSC-------------------DSADLFAIDQLICRSNPTKISRSTGKFDIQYIACSSRVLA------


General information:
TITO was launched using:
RESULT:

Template: 3MMP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) 60621 for 4449 contacts (13.6/contact) +
2D Compatibility (PS) -56862 + (NN) -1175 + (LL) 17096
1D Compatibility (HY) -8800 + (ID) 3550
Total energy: 7330.0 ( 1.65 by residue)
QMean score : 0.190

(partial model without unconserved sides chains):
PDB file : Tito_3MMP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MMP-query.scw
PDB file : Tito_Scwrl_3MMP.pdb: