Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLSIIVIIGIFIITGCDWQRTSKEPSKNAQNQQVIKIGYLPITHSANLMMTKKLLSQYNHPKYKLELVKFNNWPDLMDALNSGRIDGASTLIELAMKSKQKGSNIKAVALGH--HEGNVIMGQKGMHLNEFNNGDDYHFGIPHRYSTHYLLLEELRKQLKIKPGHFSYHEMSPAEMPAALSEHRITGYSVAEPFGALGEKLGKGKTLKHGDDVIPDAYCCVLVLRGELLDQHKDVAQAFVQDYKKSG-FKMNDRKQSVDIMTHHFKQSRDVLTQSAA-WTSYGDLTIKPSGYQEITTLVKQHHLFNPPAYDDFVEPSLYKEASRS |
| 3E4R Chain:A ((25-315)) | ------------------------------AAEPAQLRIGYQKAVSSLVLAKQHRLLEQRF-PRTKITWVEFPAGPQLLEALNVGSIDLGGAGDIPPLFAQAAGADLLYVGWVPPTPKAETILVPSKSALRTVADLKGKRIAFQKGSSAHNLLLRVLAKS-GLSMRDITPLYLSPANARAAFAAGQVDAWAIWDPWYSALTLDGSARLLANGEGLGLTG--GFFLSSRRYATAWGPFVQQVMGTLNQADGLLERDRAGSIKTLAQVSGLPPAVVERTLAHRPPASVQPLSAQVIKAQQATADLFYAQRLLPKRVLVAPAVWRAPD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69979 for 2540 contacts (-27.6/contact) +
2D Compatibility (PS) -30616 + (NN) -13348 + (LL) 2784
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -122009.0 ( -48.04 by residue)
QMean score : 0.531
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