Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRISKDIWAVFKLLYQNKGRFSINALLLQLIMIFISSTYLILLFNMMLKVAGQSQLTINNWMEIISHPASVILLIIFILSVAFLIYVEFSLLVYMVYAGFDRQIITFKSIFKNAFVNVRKLIGVPVIFFVIYLMLMIPIANLGLSSVLTKNIYIPKFLTEELMKTTKGIIIYGTFMIAVFILNFKLIFTLPLTILNRQSLFKNMRLSWQITKRNKFRLVIEIVILELIIGAILTLIISGATYLAICVDEEGDKFLVSSILFVVLKSALFFYYLFTKLSLISVLVLHLKQENVLDQPGLEFKYPKSKRKSRFFIISMVLAVTCFIGYNMYLLYNNTINTNISIIGHRGFEDKGVENSIPSLKAAAKANVEYVELDTIMTKDKQFVVSHDNNLKRLTGVNKNISESNFKDVVGLKMRQ-NG---HEAKLVSLDEFIETAKQSNVKLLVELKPHGKEPADYTQRVIDILKKHGVEHQYRVMSLDYDVMTKLKKEAPYLKCGYIIPLQFG-HFKE-T-SLDFFVIED-FSYSPRLVNQAHLENKEVYTWTING-EEDLTKYLQTNVDGIITDDPALADQIKEEKKDETYFDRSIRILFE |
1ZCC Chain:A ((1-238)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTKIVSHRGANRFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTNGTGPVGHMLSSEIDTLDAGGWFDDRFKGAIVPRLDAYLEHL-RGRAGVYIELKYCDP------AKVAALVRHLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKSPSLVGAVHHASIIEITPAQMRRPGIIEASRKAGLEIMVYYGGDDMAVHREIATSDVDYINLDRPDLFAAVRSGMAEL------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZCC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74966 for 1963 contacts (-38.2/contact) +
2D Compatibility (PS) -25298 + (NN) -10937 + (LL) 35980
1D Compatibility (HY) -6800 + (ID) 2050
Total energy: -84071.0 ( -42.83 by residue)
QMean score : 0.545
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