Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYQLVAPR-QFDVTYNNVD-IYGNHVIVRPLYLSICAADQRYYTGRRDENVLRKKLPMSLVHEAVGEVVFDSKG--VFEKGTKVVMVPNTPTEQH---HIIAENYLASSYFRS-----SGYDGFMQDYVVMAHD-RIVPLPNDIDLSTI-SYTELVSVSYHAIQRFERKSIPLKNSFGIWGDGNLGYITAILLRKLYPEAKIYVFGKTDYKLSHFS--FVDDIFTVNQ--------IPDDLKIDHAFECVGGKGSQVALQQIVEHISPEGSIALLGVSELP-VEVNTRLVLEKGLTLIGSSRSGSKDFEQVVDLYRKYPDIVEKLALLKGHEINVCTMQDIVQAFEMDLSTS-WGKTVLKWTI |
| 3JV7 Chain:A ((1-345)) | --MKAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQ--YAYGLPLTLGHEGVGTVAELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIG-DLDPVAAAPLTDAGLTPYHAISRVLPL-LGPGSTAVVIGVGGLGHVGIQILRA-VSAARVIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGA---QSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMI-PFGASVVTPYWGTRSELMEVVALAR-AGRL----DI-HTETF---TLDEGPAAYRRLREGSIRGRGVVVP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216176 for 2758 contacts (-78.4/contact) +
2D Compatibility (PS) -34138 + (NN) -5113 + (LL) 1832
1D Compatibility (HY) -8400 + (ID) 3050
Total energy: -265045.0 ( -96.10 by residue)
QMean score : 0.435
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