Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKTLQQIDKLICSWLKQIDNVIPQLIM-EMTTETKRHRFDLVTNVDKQIQQQFQQFLATHFPEHQLLAEEKSNEMI--TNEINHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEEPPSLKLEDAIISFNAQ-VMNLDT-------VQDLFD-ASFSYRLVGACGLDSMRVAKGQFGAHINTNPKPWDIAAQFLFAELLNLKMTTLDGKAIDHLKGAPFIISNKACHETVLKILNANGGYQKYR |
| 2BJI Chain:A ((4-271)) | ----PWQECMDYAVTLAGQAGEVVREALKNEMNIMVKSSPADLVTATDQKVEKMLITSIKEKYPSHSFIGEESVAAGEKSILTDNPTWIIDPIDGTTNFVHGFPFVAVSIGFVVNKKMEFGIVYSCLEDKMYTGRKGKGAFCNGQKLQVSHQEDITKSLLVTELGSSRTPETVRIILSNIERLLCLPIHGIRGVGTAALNMCLVAAGAADAYYEMGIHCWDVAGAGIIVTEAGGVLLDVTGGPFDLMSRRVIASSNKTLAERIAKEIQIIPL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165417 for 2216 contacts (-74.6/contact) +
2D Compatibility (PS) -27699 + (NN) -7118 + (LL) 716
1D Compatibility (HY) -11600 + (ID) 2950
Total energy: -214068.0 ( -96.60 by residue)
QMean score : 0.533
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