Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLISIAFLLVLCLLNYSSFRMLKSFLTLKKISRYAYLGFFILLSAGEATFVFYRNVMPSHLFVLTSACSFVSFIAFVFSLSFYGFSYSVEKIDFLPSRRKGLKNFLRIGFYLALLGYFWRGFYEGLARPKIKETPIYLDKLDKELKIILLTDMHVGSLLQ---------KDFVNYIVEEVNQKEVDMVLIGGDLVDENIE---KVKSFLLPLNNLK-STHGTFYVPGNHEYYHGIEPILSFLNTLD-MTILGNE-------CV----------HL----GGINLCGVYDYFARKRQDFAPDIDK---ALKK-RDSSKPTILLAHQPKQIRS-------------LKESHSIDLVLSGHTHAGQIFPFSLLVKLAQTYLHGLYKHSGTTQIYVSSGAGYWGIPLRFLAPSEIAYLRLLPKNQA |
| 1II7 Chain:A ((1-215)) | ------------------------------------------------------------------------------------------------------------------------------------------------MKFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSIPVFAIEGNHDRTQRGPSVLNLLEDFGLVYVIGMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMS-------SAWFEANKEILKRLFRPTDNAILMLHQGVREVSEARGEDYFEIGLGDLP-EGYLYYALGHIHKRYETSYSGSPVVYPGSLERWDFGDYEVRYEWDGIKFKERYGVNKGFYIVEDFKPRFVEIKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1II7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108724 for 1199 contacts (-90.7/contact) +
2D Compatibility (PS) -17589 + (NN) -7603 + (LL) 12820
1D Compatibility (HY) -7600 + (ID) 1750
Total energy: -130446.0 ( -108.80 by residue)
QMean score : 0.378
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