Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------MFFKFILCLSLGIFAWAKEVIPTPSTPLTPSKRYSINLMTENDGYINPYI-----DEYYTAGNQIGFSTKEFDFSKNKAMKWSSYLGFFNKSP-RVTRFGISLAQDMYTPSLANRKLVHLHDNHPYGGYLR-VNLNVYNRHQTFM-ELFTISLGTTG-------------QDSLAAQ-TQRLIHK--WGHDPQFYGWNTQLKNEFIFELHYQLLKKVPLLKTRFFSMEL----MPGFNVELGNARDYFQLG-SLFRAGYNLDADYGVNKVNTAFDGGMPYSDKFSIYFFAGAFGRFQPLNIFIQGNSPETRGIANLEYFVYASE-IGAAMM---WRSLRVAFTITDISKTFQSQPKHHQI---GTLELNFAF |
| 3K0B Chain:A ((1-384)) | SSGRENLYFQGMKSFQLVATAASGLEAIVGKEVARLGYDPKVENG-KVYFEGDLSAIARANLWLRVADRVKIVVGVFKATTFDELFEKTKALPWEDYLPLDAQFPVAGKSVKSTLYSVPDCQAIVKKAIVNRVSEKYRRSGRLMETGALFKLEVSILKDEVTLTIDTSGAGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCG-SGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQ-VADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTW-SVYVLTSYELFEEVYGKKATKKRKLYRTDLYQYWGP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K0B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83271 for 2598 contacts (-32.1/contact) +
2D Compatibility (PS) -34501 + (NN) -5547 + (LL) 500
1D Compatibility (HY) -4000 + (ID) 2150
Total energy: -128969.0 ( -49.64 by residue)
QMean score : 0.193
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