Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKILVIGDLIADYYLWGKSERLSPEAPVPVLEVKKESKNLGG-AANVANNLTSLKAKVFLCGVVGDDLEGKHFISTLKTRGIDTSGVLIDKTRCTTLKTRIIA-QNQQIVRVDKEIKDPLNADLRKNLLDFIAEKIQEIDGVILSDYNKGVLDFELTQTIITLANKHHKLILCDPKGKD----YSKYSHASLITPNRAELEQALHLKLDSHANLSKALQILQETYHIAMPLVTLSEQGIAFLEKG--ELVNCPTIAKEVYDVTGAGDTVIASLTLSLLE--SKSLKEACEFANAAAAVVVGKMGSAL--ASLEEIALILNQTHPKILPLEKLLETLERNQQKIVFTNGCFDILHKGHASYLQKAKALGDILVVGLNSDNSIKRLKGDKRPIVSEKDRAFLLASLSCVDYVVVFGEDTPIKLIQALKPDILVKGADYLNKEVIGSELAKETRLIEFEEGYSTSAIIEKIKRTHND |
| 2FV7 Chain:A ((24-330)) | VAAVVVVGSCMTDLVSLT--SRLPKTG--ETIHGHKFFIGFGGKGANQCVQAARLGAMTSMVCKVGKDSFGNDYIENLKQNDISTEFTYQTKDAATGTASIIVNNEGQNIIVIVAGANLLLNTEDLRA----AANVISRAKVMVCQLE----ITPATSLEALTMARRSGVKTLFNPAPAIADLDPQFYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLL-KRGCQVVIITLGAEGCVVLSQTEPEPKHIPTEKVKAVDTTGAGDSFVGALAFYLAYYPNLSLEDMLNRSNFIAAVSVQAAGTQSSYPYKKDLPLTLF---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FV7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169578 for 2647 contacts (-64.1/contact) +
2D Compatibility (PS) -30759 + (NN) -4369 + (LL) 11668
1D Compatibility (HY) -10000 + (ID) 3400
Total energy: -206438.0 ( -77.99 by residue)
QMean score : 0.467
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