Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLGLSSLGGTLEFYDFIIFVFFTSIIAKHFFPNTLSPIWSEINTYGIFAAGYLARPLGGIVMAHFGDKFGRKNMFMLSILLMVIPTFALALMPTFNDLVGFGVDSMGLTPKNAHYLGYIAPVFLVLVRICQGVAVGGELPGAWVFVHEHAPQGQKNTYIGFLTASVVSGILLGSLVYIGIYMVFDKPVVEDWAWRVAFGLGGIFGIISVYLRRFLEETPVFQQMKQDDALVKFPLKEVFKNSLFGISISMLITWVLTACILIFILFVPNFTLTHPNFHFTPFEKTYFQILGLVGIVSSIIFTGFLADKIKPHKVCMAFSAAFGFFGFLFFKEFYSNAPSLVNTIILYFLACF-CAGIMNFCPIFMSDVFSARIRFSGISFAYNIAYAITAGFTPQLSSWLNAKAIAVPESLQSYGLSFYILIVSLIAFITSLLMAPIYHKSNTQHEVSPTA |
3O7Q Chain:A ((38-177)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WAVANNLNDILLPQFQQA---FTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPA--AEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQ-TFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIM |
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General information:
TITO was launched using:
| RESULT:
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Template: 3O7Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126356 for 944 contacts (-133.9/contact) +
2D Compatibility (PS) -13566 + (NN) 997 + (LL) 19332
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -126093.0 ( -133.57 by residue)
QMean score : 0.180
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