Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEYKDTLNLNETTFSMKGNLSVNEPKTYAKWQEQQAFKRMQNRKDNHGDFTLHDGPPYANGHLHLGHALNKILKDIVIKREYFKGKKIYYTPGWDCHGLPIEQQILEQLEKEKT------SLENPTL----FREKCRDHAKKFLEIQKNEFLQLGVLGDFEDPYKTMD--FKFEASIYRALVGVAKKGLLKERHKPIYWSYACESALAEAEVEYKMK--KSPSIFVAFDLKKEGLEKLKVKKASLVIWTTTPWTLYANVAIALKKDAVYALTQK-----G--YLVAKALHEKLAALGVVDNAITHEFNSNDLEYLVATNPLNQRDSLVVLGDHVSLEDGTGAVHTAPGHGEEDYY----------LGLKYHLEVL--MSVD--------EKGCYDEG------I----------IHNQLLDKSYLGEHIFKAQKRIIEQLGD-SL-LLEREIEHSYPHCWRTHKPVIYRATTQWFILMDEPFIQNDGSQKTLREVALDAIEKVEFVPSSGKNRLKTMIENRPDWCLSRQRKWGVPLAF---FIDKRTNKP-C--FESEVLEHVANLFEEKGCDVWWEYNIKDLLPPSYQDNAKHYEKVMHILDVWFDSGSTFKAV------LEDY--------HGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCVLN-NQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHGSDVVRLWVAFND-YQNDLRVSQTFFIQTEQHYKKFRNTLKFLLANFSDMDLKNLERPHDFSPLDHFILEALETISAGVNSAFEEHDLVKGLNILMAFVTNELSGIYLDACKDSLYCDSKNNEKRQAIQMVLLAVASQLCYFLAPILTHTIEEVLEHSQVLRAFLQAKDVFDLKGISVLEKLHLKEFKKPENFEAVLALRSAFNEELDRLKKEGVVKNSLECAIEVKEKALCENLVEELLMVSFVGVAKEKLSETPAFTLFKAPFYKCPRCWRFKSELENTPCKRCEEVLKER |
| 1WKB Chain:A ((4-810)) | ------------------LNFKAIEEKWQKRWLEAKIFEPNIRDKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHITGSPIVGIAERIKNRDPKTIWIYRDVYKVPEEILWTFEDPINIVKYFMKAAKETFIRAGFSVDWSREFYTTSLFPPFSKFIEWQFWKLKEKGYIVKGAHRVRWDPVVGTPLGDHDLMEGEDVPILDYIIIKFELRENG------EVIYLPAATLRPETVYGVTNMWVNPNATYVKAKVRRKDKEETWIVSKEAAYKLSFQD-REIEVIEEFKGEKLIGKYVRNPVSGDEVIILPAEFVDPDNATGVVMSVPAHAPFDHVALEDLKRETEILEKYDIDPRIV----FPAVEEVNKLGIKSQKDKEKLEQATKTIYKAEYHKGIFKVPPYEGKPVQEVKEAIAKEMLEKGIAEIMYEFAEKNVISRFGNRAVIKIIHDQWFIDYG---------NPEWKEKARKALERMKILPETRRAQFEAIIDWLDKKACARKIGLGTPLPWDPEWVIESLSDSTIYMAYYTISRHINKLRQ-EGK-----------------LD--PEKLTPEFFDYIFLEEFSEDKEKELEKKTGIPAEIIHEMKEEFEYWYPLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWPKGIAVNGFGT-LEGQKMSKSKGNVLNFIDAIEENGADVVRLYIMSLAEHDSDFDWRRKEVGKLRKQIERFYELISQFAEYEV--K-----GNVELKDIDRWMLHRLNKAIKETTNALEEFRTRTAVQWAFYSIMNDL-RWYLRRTEGRD---------DEAKRYVLRTLADVWVRLMAPFTPHICEELWEKLG-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WKB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -268243 for 5775 contacts (-46.4/contact) +
2D Compatibility (PS) -76477 + (NN) -28325 + (LL) 16348
1D Compatibility (HY) -23600 + (ID) 6850
Total energy: -387147.0 ( -67.04 by residue)
QMean score : 0.391
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