Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLTLKGKYNEAKVFTDNVDDNTIGQIITLCNQPFAKDSKIRIMPDTHGGKGCVIGTTMTIQDKIVPNLVGVDIGCGLYVVKLKPGKLKMDFDKLDKVIRERVPSGSKTHDKPVDEFDLEGIVAPIHHGWVARSIGTLGGGNHFIEVNQGSDGIYLVIHSGSRVLGKEIAEYHQEVAYKRLDILRKELKLDATAAKKRGNLEMANNLNGEREQVKLDYDLSYVTGVDLKNYLNDMEIAQKFAARNRYVMAQIILKAMKWDKAVVSAFDCVHNYIDIEHNMLRKGATSAQLGEQIIVPLNMREGSILATGKGNADWNYSAPHGAGRMLSRSKAKAQISLESYQAAMKDVWTTSVSKKTIDEAPKAYKSAKQLLADVEDTMEIQEIIKPLYNFKA |
4YV4 Chain:A ((7-53)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAENWRDAMKTELQTIRTEIQEETARRQEELNAQNLVKMQELMSNFF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YV4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6712 for 181 contacts (37.1/contact) +
2D Compatibility (PS) -5300 + (NN) -4511 + (LL) 21908
1D Compatibility (HY) 1200 + (ID) 300
Total energy: 19709.0 ( 108.89 by residue)
QMean score : 0.326
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