Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKKEERLGVLLWFRFSRFYNRNMKLTNQNLRAAGISTAQFDCIAQIGLDKEITQQQLAEKLVVTKGNVTQLLAKLEQLGYITRTK---TGREKHITLTEKGQACYRENVPKQEAFQQAQFDKLTRDEQKELLKLLKKLGE
2FBI Chain:A ((5-136))
----RPSLTLTLLQA----REAAMSFFRPSLNQHGLTEQQWRVIRILRQQGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRRVYVNLTEKGQQCFVSMSGDMEKNYQRIQERFGEEKLAQLLELLNELK-
General information:
TITO was launched using:
RESULT:
Template:
2FBI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29274 for 810 contacts (-36.1/contact) +
2D Compatibility (PS) -14365 + (NN) -8727 + (LL) 968
1D Compatibility (HY) -9200 + (ID) 1700
Total energy: -62298.0 ( -76.91 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_2FBI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FBI-query.scw
PDB file :
Tito_Scwrl_2FBI.pdb
: