Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MPKLII---DADDFGLSKAINH-------GI-IESYKTGITTSTLLMP-NLETAEHAIALAKN---------------HPDLFIGQHTNFL----LGKP-CANPAE-IPSLVDENGEFHRSKYYRANPELKFQYEDVRTETIAQMERFKALTGHYPEHIDCHSIG-DET-VDQAFFDI---AREFGIHTTLK--------YSGDKKW-SD----QEGYLPIT---KLLESG---------ALPYTNGGVSVE-NFLNDDFGLLKLAPN-------EIAEMHFDVGFL----------DQFVL-----DNSSYTLMR-CRE------LATIC-------DVRVRDWLLENGFELITFGDLQR------------------------------- |
| 4DIM Chain:A ((3-400)) | DNKRLLILGAGRGQLGLYKAAKELGIHTIAGTMPNAHKPCLNLADEISYMDISNPDEVEQKVKDLNLDGAATCCLDTGIVSLARICDKENLVGLNEEAAIMCGDKYKMKEAFKKYNVNTARHFVVRNENELKNALENLKLPVIVKATDLIYIAKKEEEAIDGFNETMNLTKRDYCIVEEFIEGYEFGAQAFVYKNDVLFVMPHGDETYMSHTAVPVGHYVPLDVKDDIIEKTKTEVKKAIKALGLNNCAVNVDMILKDNEVYIIELTGRVGANCLPELVEINYGIEYYKMIASMAISENPLVFWSQKSKENKAGLARMIIETEKSGILKEILNSNAKDDDIVEITFFKEENDEIKKFENSNDCIGQIIVKEETLDKCKDKLDVIINNINIILK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4DIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14104 for 1516 contacts (9.3/contact) +
2D Compatibility (PS) -26986 + (NN) 5334 + (LL) 0
1D Compatibility (HY) 8800 + (ID) 1200
Total energy: 52.0 ( 0.03 by residue)
QMean score : -0.114
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