Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRREAREKALQALFQIELNEM-SLDQAIKN-----IMEDEQDDYMEKLVEGVMANKAEIDAIIEPNLDNWRMDRLSKVDLSLLRLSVYEIKYLDDVPNRVSLNESIEIAKIYSDEKSSKFINGVLANIAPEDK
1TZV Chain:A ((3-134))
TPRRRMRLAVFKALFQHEFRRDEDLEQILEEILDETYDKK-AKEDARRYIRGIKENLSMIDDLISRYLEKWSLNRLSVVDRNVLRLATYELLFEKDIPIEVTIDEAIEIAKRYGTENSGKFVNGILDRIAKEH-
General information:
TITO was launched using:
RESULT:
Template:
1TZV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53803 for 943 contacts (-57.1/contact) +
2D Compatibility (PS) -13966 + (NN) -8688 + (LL) 168
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -88239.0 ( -93.57 by residue)
QMean score : 0.695
(partial model without unconserved sides chains):
PDB file :
Tito_1TZV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TZV-query.scw
PDB file :
Tito_Scwrl_1TZV.pdb
: