Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNFEKIETAYELILENIQTIENQLKTHIYDALIEQNSYYLGSSCDLDIVVVNNQKLRQLD-LSQEEWRRTFQFIFIKSAQTEQLQANHQFTPDSIGFILLFLLEELTSQETVDVLEIGSGTGNLAQTLLNNSSK------------ELNYMGIEVDDLLIDLSASIAEIIGSS-AQFIQEDAVRPQI-----LKESDVIISDLPIGYYPNDDIAKRYAVSSSKEHTYAHHLLMEQSLKYLK-------KDGIAIFLAPENLLTSP-QSDLLKEWLKGYADVIAVLTLPETIFGS-RQNAKSIFVLKKQAEQKPETFVYPLTDLQNRENMANFIENFQKWSRENSHYSKNMIE |
| 3UFB Chain:A ((158-426)) | ---------------------------------------------RDVVDKING-IHFNSSEEMHTLSRLYETMLREM-RDAAGDSGEFYTPRPVVRFMVEVM---DPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPE--DMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGTLFSDGISARIKEELLKNFNLHTIVRLPEGVFAPYTDIAGNLLFFDRSGP-TDDIWYYQITVPEGRKKYTKTKPMESHEFDECLNWWSNRIV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UFB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104651 for 1858 contacts (-56.3/contact) +
2D Compatibility (PS) -25355 + (NN) -5516 + (LL) 4396
1D Compatibility (HY) -9200 + (ID) 2250
Total energy: -142576.0 ( -76.74 by residue)
QMean score : 0.396
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