Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNVTSYKEMLAKPWGKIQYEITFAQLSHI--KNQNVLDFGAGFCLTAQHLAKE-NNVTAIEPNPKLLYDNQSD---NIYK-ILGSYEALRDLPNQSFDTIICHNVLEYIDKHNHPAYFDEFSRLLKPNGELSLIKHNITGKILQSVIFSNDTSTAMELLTGEANFKSASFDQGNIYTLEELKQNT---NLLVERYQGIRTFYSLQPNHFKTETGWLNKMLAIELSVADKAPYKDIAFLQHITLKKSL |
| 3L8D Chain:A ((32-201)) | -----------QEMWDSGSRSTIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLP-FENEQFEAIMAINSLEWTE--EPLRALNEIKRVLKSDGYACIAILGPTAKPRENS-----YPRLY---G--------KDVVCNTMMPWEFEQLVKEQGFKVVDGIGVYKRGVNEKMLGQLSTDLQQSLTFLWVFMLKRHK---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61687 for 1210 contacts (-51.0/contact) +
2D Compatibility (PS) -16711 + (NN) -1395 + (LL) 2744
1D Compatibility (HY) -3600 + (ID) 1450
Total energy: -82099.0 ( -67.85 by residue)
QMean score : 0.392
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