Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVTVEKNRAVTFQANKELVSEAMTVLNKKNLTLSSALRLFLQNVVVTNEVDLLTEEELEKEKLFKQFQAEISKNIEDVRQGKFYTSEEVRAELGL
1X93 Chain:A ((31-71))
------TRAVSLYFSDEQYQKLEKMANEEEESVGSYIKRYILKALRKIE----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1X93.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12426 for 183 contacts (-67.9/contact) +
2D Compatibility (PS) -4364 + (NN) -2494 + (LL) 5040
1D Compatibility (HY) -800 + (ID) 300
Total energy: -15344.0 ( -83.85 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_1X93.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X93-query.scw
PDB file :
Tito_Scwrl_1X93.pdb
: