Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKTKFSDPL-EQLAKKRKRKTLFK----TVVLALITVLLVVGIAFKGFTYLTSKNGQKTYHNFELLSEIAYPNISYDSLYY-QPSGQFTGKVHADRFKDIDGVQIPYSSFEEN---------YSISGTFGTNADEKSEKNGLYDRGTRQKVPQFFNKNVKYKKGEAKTTPTNDLKYVNKLNNDLIEIA--ITFDKSY-----SYKEIKTMIPNNIKQNWLWIGTSTELDTSYWPTKYQFGTDPETLNTPQIF-IDKIKENLKGNSKVYFNNINIYSDLEKYAKKYDKVNNSDKLKFSGIILTGKAENFKQLKEKEWVHASSIGA-NIEYKPYYKLDKE |
| 4INO Chain:A ((1-302)) | -QEVKVKDYFGEQTIKLPVSKIIYLGSFAEVPAMFHTWDRVVGISDYAFKSDIVKATLKDPERIKPMSSDHAAALNVELLKKLSPDLVVTFVGNPKAVEHAKKFGISFLSFQEKTIAEVMEDIDTQAKALEVDASKKLAKMQETLDFIAERL-----KGVKKKKGVELFHKANKISGHQALDSDILEKGGIDNFGLKYVKFGRADISVEKIVKENPEIIFIW-----------WISPL---SPEDVLNNPKFATIKAIK-----NKQVYK------------LPTMDIGGPRAPLISLFIALKAHPEAFKGVDINAIVKDYYKVVFDLNDAEVEPFLWH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4INO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 48607 for 2159 contacts (22.5/contact) +
2D Compatibility (PS) -28092 + (NN) 5053 + (LL) 1564
1D Compatibility (HY) -7600 + (ID) 2900
Total energy: 16632.0 ( 7.70 by residue)
QMean score : 0.052
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