Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRIIAITEKVIKELFRDKRTLAMMFLAPI-----LIMFLMNVMFSANSNTKVKIGTINVNTKVVSNL----DNIKHIKVRSFKFNSSAKKALKSNKIDALISE--DNKSYTLFYANTDSSKTTLTRQAFKTAVNTMNSKEL---ISQVKILANKNPKLAQSLQTRSKYIKEKYNYGNKNTGFFAKMIPILMGFMVFFFVFLISGMALLKERTSGTLDRLLATPVKRSDIVFGYMLSYGILAIIQTIVIVLSTIWLLDIQVVGSIFSVIIV-NFILALVALSLGILMSTLAKSEFQMMQFIPLIIMPQLFFSGIIPLENMANWAQTVGKILPLSYSG-DALTKIIMYGQGLSNVSSNLLVLLLFLIILTIANIFGLKRYRKV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4Q71 Chain:A ((3-990)) | MPNIPPPFTAPYAPDDAEIAARLLPASHLSPPQEARIHRTATRLIEAIRKRLGGVEDMLREFALSTKEGLALMVLAEALLRVPDARTADQFIEDKLGEGDFIHHETKSTAFLVNASAWARVIQPGETPDGTIGRLVKRLGAPAVRTATRQAMRLMGNHFVLGETIEQALERGKPGQKTRYSFDMLGEGARTAADARRYFDAYASAIETIGKAAGNHALPDRPGISVKLSALHPRFEAISRARVMVELVPQLLDLAQRAKAHDLNFTVDAEEADRLELSLDVIAATLADPSLKGWDGFGLAIQAYQKRASAVIDYVDALARAHDRKLMVRLVKGAYWDTEIKRAQERGLDGYPVFTRKAMTDLNYVACASKLLALRPRIFPQFATHNALTVATVLEMAEGSSGFEFQRLHGMGEALYEQLAKDHADIAYRTYAPVGSHRDLLAYLVRRLLENGANSSFVAQAADYRVPVPALLQRPADAIVRPQAAAHPRIPLPCDLFAPERRNSRGVEFGARTALDQLLTDVKAEIADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKT--LDDALSELREAADFCRYYAAQGRKLFGSETA------MPGPTGESNAL--TMRGRGVFVAISPWNFPL-------AIFLGQVTAALMAGNSVVAKPAEQ----TPRIAREAVALLHEAGI---PKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATAL--PEQVADWVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCFVAPHIFELTEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINTAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -223206 for 2408 contacts (-92.7/contact) +
2D Compatibility (PS) -35332 + (NN) 1133 + (LL) 2000
1D Compatibility (HY) 2400 + (ID) 2550
Total energy: -255555.0 ( -106.13 by residue)
QMean score : 0.206
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