Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALFSKKDKYIRISPNKALGSSDKRSLPEVPDELFAKCPSCKHMIYQKDLGLAKICPACSYNFRISAQERLLLTVDEDSFEELFTGIETKDPLNFPNYREKLAATRQKTNLDEAVVTGLAKIKGQTTALAIMDSHFIMASMGTVVGEKLTRLFELATEKKLPIVIFTASGGARMQEGIMSLMQMAKVSAAVKRHSNQGLFYLTILTDPTTGGVTASFAM---EGDIILAEPQALVGFAGRRVIETTVR-EDL---P----------------------EGFQKAEFLLEHGFVDAIINRTELRDCIAQLIAFHGNEVGHE |
| 3U9R Chain:B ((309-544)) | ---------------------------------------------------LYGVIPA-DSKQPYDVREVIARLVDGSEFDEFKAL------------------------FGTTLVCGFAHLHGYPIAILANN-----GILFAEAAQKGAHFIELACQRGIPLLFLQNITGFMVGQKYEAGGIAKHGAKLVTAVACARVPKFTVLIGGSFGAGNYGMCGRAYDPRFLWMWPNARIGVMGGEQAAGVLAQVKREQAERAGQQLGVEEEAKIKAPILEQYEHQGHPYYSSARLWDDGVIDPAQTREVLALALSAALNAPIEP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3U9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134801 for 1648 contacts (-81.8/contact) +
2D Compatibility (PS) -22506 + (NN) -11470 + (LL) 4684
1D Compatibility (HY) -5200 + (ID) 1650
Total energy: -170943.0 ( -103.73 by residue)
QMean score : 0.437
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